PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI21186.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 132aa    MW: 14451 Da    PI: 10.2648
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI21186.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.91.3e-0698125330
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
         HLH   3 rahnerErrRRdriNsafeeLrellPka 30 
                  +h+ +Er RR++i +++  L+el+P +
  MCI21186.1  98 NSHSLAERVRREKISERMKFLQELVPGC 125
                 58************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
EGSPMLEGTT SGEPSIKGLN SKKRKRSGQD ADNDKADGAR ELQSEGAKDN PENQQKGDQQ  60
PTSVTKASGK NVKQGSQTSD PPKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQE  120
LVPGCSKVAS KF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12227KKRKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.35e-38bHLH family protein