PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI20309.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family TCP
Protein Properties Length: 166aa    MW: 19021.7 Da    PI: 9.8509
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI20309.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP113.52.8e-351881265
         TCP  2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65
                 g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LGfd++sk+++WL+++akpai++l ++
  MCI20309.1 18 RGRKDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGFDRPSKALDWLINKAKPAIDQLDQL 81
                689*********************************************************9988 PP

Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MNGGEIVEVD GGHIIRSRGR KDRHSKVCTA KGPRDRRVRL SAHTAIEFYD VQDRLGFDRP  60
SKALDWLINK AKPAIDQLDQ LPPWKPXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXFRF  120
LQNFNSNSNG FVPFESEIGE TTSSSPIQFP DLLSRTNSND LRLSLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.25e-48TCP family protein