PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI20193.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 98aa    MW: 10960.1 Da    PI: 8.2001
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI20193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.34.9e-115070121
                ---SS-EEEEEEE--TT-SS- CS
        WRKY  1 ldDgynWrKYGqKevkgsefp 21
                ldDg++WrKYGqK+vkg++++
  MCI20193.1 50 LDDGFRWRKYGQKVVKGNPNA 70
                59***************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
YSGGGNDDAN GPEAKRWKGD NENDVYSASA SRTVKEPRVV VQTTSEIDIL DDGFRWRKYG  60
QKVVKGNPNA SHNCCYDVLT DTSKTVVLWL QLRLRNAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.16e-28WRKY family protein