PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI19880.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | Dof | ||||||||
Protein Properties | Length: 172aa MW: 18277.2 Da PI: 10.816 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123 | 1e-38 | 58 | 116 | 4 | 62 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++kcprC+stntkfCyynny+lsqPr+fCk+CrryWt+GGalrnvPvGgg+r+n+k+s MCI19880.1 58 ATQKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKRS 116 5689**************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
QAGIGIGTQN SSLPLQQPSA STVTVTVAAD GSYQGSIRQR SMTDQAKMSK IHQNDVAATQ 60 KCPRCESTNT KFCYYNNYNL SQPRHFCKTC RRYWTRGGAL RNVPVGGGCR RNNKRSKGNS 120 ISKSTSKPNR NDHRLVGTGG GGGGSSSASA NSSSNNGCTN SNVNVGISHF PT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07640.1 | 2e-37 | Dof family protein |