PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI17193.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | Trihelix | ||||||||
Protein Properties | Length: 225aa MW: 24549.4 Da PI: 9.7336 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 51.8 | 2.1e-16 | 53 | 145 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ + +L++a e+ +l+rg+l++++W+ev++++ r+ +r+ +qCk++++ l+k+yk +k++ ++ + +s +p+f++l+ MCI17193.1 53 CWSEDATSTLVDAWGERYVDLNRGNLRQKHWQEVADAVndihaagNNRKARRTDVQCKNRIDTLKKKYKIEKARVSESDGGYQSPWPFFSRLD 145 7********************************************99***************************9999999999******997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MASFSGADQT QPSTDFSNAT SVFMDSITGG PSPVNFAPPR PPSSYPFPGR EDCWSEDATS 60 TLVDAWGERY VDLNRGNLRQ KHWQEVADAV NDIHAAGNNR KARRTDVQCK NRIDTLKKKY 120 KIEKARVSES DGGYQSPWPF FSRLDILIGD TFPVKKLSPP ATVRTTPAAV KPPLSPPAWI 180 ISHPVGPRSG TQKRPALMNR DDASFRRNFS AFAAAAAAAA EAESG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 3e-53 | Trihelix family protein |