PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI15711.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 136aa    MW: 15443.4 Da    PI: 8.4966
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI15711.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix64.72e-2058135169
    trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 rWt+qe+l+Liea++ +e+  +  +         +  p+W+ vs+ ++++g++r+++qC+++w nl ++++kik++e 
  MCI15711.1  58 RWTRQETLVLIEAKKVIENGDQVCRyrsstsglvQTDPKWDLVSSLCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWET 135
                 8**************9988777432334467788******************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MSEMNEPNSE KVCETIAEPN SEKVCETSGE SPTTPVGKQA EEAEPKSGER IKATRHPRWT  60
RQETLVLIEA KKVIENGDQV CRYRSSTSGL VQTDPKWDLV SSLCQQHGVK RGAVQCRKRW  120
GNLLTDFRKI KKWETN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-27Trihelix family protein