PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI15210.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family TCP
Protein Properties Length: 200aa    MW: 21870.3 Da    PI: 7.5824
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI15210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1356.7e-42621831115
         TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg......kaak 92 
                 +a+k+ +++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s++      + ++
  MCI15210.1  62 PAPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTMSAPshyfraDDSR 160
                 589*******************************************************************99987778888888666666666664444 PP

         TCP  93 saakskksqksaasalnlakesr 115
                  +++  ++++s ++ ln+++ ++
  MCI15210.1 161 RNNNMMENPSSLSAILNFNNVQN 183
                 44444555555555666666555 PP

Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
NIMELEGDHQ NNGIRSRPNF PLQLLEKKDN NILDVSEEQQ PCSTTANDGS GTIITSDNQK  60
KPAPKRASTK DRHTKVDGRG RRIRMPAACA ARVFQLTREL GHKSDGETIE WLLQQAEPAV  120
IAATGTGTIP ANFTSLNISL RSSGSTMSAP SHYFRADDSR RNNNMMENPS SLSAILNFNN  180
VQNAILQAKQ ELPEENASGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.19e-54TCP family protein