PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI14836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 105aa MW: 12289.2 Da PI: 7.1444 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 110.8 | 1.8e-34 | 2 | 105 | 190 | 292 |
GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsles.erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287 +le+L++++gEa+aVn++++lh+++de+v+ + +rd++++lvk lsPkvv++veqe+++n+ +Fl rf+e+++yy a+f+s++++lpre++eri+vE+ MCI14836.1 2 KLEDLKLRRGEAIAVNFAMMLHHVPDENVHGGQnHRDRLVRLVKCLSPKVVTLVEQESNTNELPFLPRFVETMNYYLAVFESIDVSLPREHRERINVEQ 100 6899************************9877669**************************************************************** PP GRAS 288 ellgr 292 ++l+r MCI14836.1 101 HCLAR 105 **986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence |
MKLEDLKLRR GEAIAVNFAM MLHHVPDENV HGGQNHRDRL VRLVKCLSPK VVTLVEQESN 60 TNELPFLPRF VETMNYYLAV FESIDVSLPR EHRERINVEQ HCLAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 3e-49 | GRAS family protein |