PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI13728.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | Dof | ||||||||
Protein Properties | Length: 118aa MW: 13169.9 Da PI: 11.2695 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122.4 | 1.5e-38 | 14 | 73 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e ++kcprCdstntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg+r+nk+++ MCI13728.1 14 EPSQKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRTK 73 56789****************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 118 aa Download sequence |
MADRARMANI PMQEPSQKCP RCDSTNTKFC YFNNYSLSQP RHFCKTCRRY WTRGGALRSV 60 PVGGGCRRNK RTKSSNNNTS KSPVSSDRQT SSANNSPAVL SSPTPPPMRF MAPLHQLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02460.1 | 3e-39 | Dof family protein |