PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI11453.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | Trihelix | ||||||||
Protein Properties | Length: 219aa MW: 24837.3 Da PI: 5.7411 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 58.4 | 1.8e-18 | 73 | 160 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +W++ + +L+ea++++ ++l+rg+l++ +Weev++ + ++s +qCk+k +nl+kryk ++++++++ + s s++p+++q+e+ MCI11453.1 73 EWSDTAIVCLLEAYTDKFTQLNRGNLRGRDWEEVASXXxxXCENQSKSVEQCKNKVDNLKKRYKLERHRMNNG-CISASHWPWYKQMEH 160 5***********************************9988889999**************************8.99999********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
STASVHSKPV ADDDTDDYGN PFDDDAGSEK RKDRDEIGDA TTSYAFNKRP KPVSSGSGGV 60 GGVGAEYRKD REEWSDTAIV CLLEAYTDKF TQLNRGNLRG RDWEEVASXX XXXCENQSKS 120 VEQCKNKVDN LKKRYKLERH RMNNGCISAS HWPWYKQMEH IVGNSLPSKF ADDDKAIVPA 180 SISPRQSKRF LLFLFFCFXX XXXXXXXXXX LGDYGLELE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10030.2 | 6e-60 | Trihelix family protein |