PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI11153.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GATA | ||||||||
Protein Properties | Length: 172aa MW: 19532 Da PI: 9.4955 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.4 | 2.6e-20 | 131 | 165 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+ +Tp+WR gp+g+ktLCnaCG++y++ +l MCI11153.1 131 CHHCGADNTPQWRAGPNGPKTLCNACGVRYKSGRL 165 *******************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MNDVKINVPV IFMFQEYAEE ELEWLSNKDA FPAVETFVDI SCIQPDMSKY QKTTPTLENS 60 TSSSNNSNNS SNSITLLSGY NQMKFPVRAR SKSRSKPRLV DTLNQQFPWK QPSTKISREQ 120 VRPTSNIERK CHHCGADNTP QWRAGPNGPK TLCNACGVRY KSGRLVPEYR PA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24050.1 | 2e-25 | GATA family protein |