PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI10608.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family TCP
Protein Properties Length: 262aa    MW: 29312.4 Da    PI: 8.295
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI10608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP123.91.8e-38201352120
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg......... 88 
                 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai+el+++++ +++++   ++++++++ ++++++         
  MCI10608.1  20 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAQLPAWNPTATcstTPQQQQQQLQQQTNEmfnrqspvd 118
                 79**************************************************************55555333244333333333322222233333333 PP

         TCP  89 ..........kaaksaakskksqksaasalnlakesrakara 120
                           +                        s   a +
  MCI10608.1 119 nhqvtastihR------------------------SA-AALE 135
                 33333333321........................11.1222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
SKRIAGEIVE VQGGHIVRST GRKDRHSKVC TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD  60
RPSKAVDWLI KKAKSAIDEL AQLPAWNPTA TCSTTPQQQQ QQLQQQTNEM FNRQSPVDNH  120
QVTASTIHRS AAALERRMPP QQEQFSSQQL ELDYNNSSSG KHGFLQGSLD TDIAXXXXXX  180
XXXXXXXXXX XXXXQPPDLL SRTAATAQQQ DLRLSLQSFQ DPILLQSHHD NHHHHNQVLF  240
AGNSSLGGYD GGGSGSTLWS EQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.28e-53TCP family protein