PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI08719.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 109aa    MW: 12573.4 Da    PI: 8.6752
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI08719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM116.82.2e-3611103194
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                 lppGfrFhP+d el+v+yL++kv++++l++ ++i+e+d+yk++Pw+Lp+k+  +e+ewyfF++rd+ky++g r+nra+ +gyWkatg+dk++l+
  MCI08719.1  11 LPPGFRFHPSDAELIVHYLRNKVNSSPLPA-SFIAEIDLYKYNPWELPSKALFGEEEWYFFTPRDRKYPKGLRPNRAAGAGYWKATGTDKPILT 103
                 79****************************.89***************8777899************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MDKNPHSEIQ LPPGFRFHPS DAELIVHYLR NKVNSSPLPA SFIAEIDLYK YNPWELPSKA  60
LFGEEEWYFF TPRDRKYPKG LRPNRAAGAG YWKATGTDKP ILTSCCMIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.14e-53NAC family protein