PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI08669.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family SBP
Protein Properties Length: 191aa    MW: 20746.4 Da    PI: 7.1632
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI08669.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP45.12.6e-14157190235
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEE CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlv 35 
                 Cqv gC++dls +k+yh+rhkvCevhsk+++v+v
  MCI08669.1 157 CQVYGCNKDLSGCKDYHKRHKVCEVHSKTSKVIV 190
                 ********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MDSWSFVPED NKGYVSKGSI LGWELKTPSS FLGQQNIEND NNQGFEELGF HGMLGKQLSN  60
VVDVXXXVDD VHTRKMDNDV VMAAPNAFSG RELSNSLGET NGCNSLIDLK LGRFGDHGDA  120
IGTSFSKGTA ILSSSGSSST PPKRVRSSSV HSQVAYCQVY GCNKDLSGCK DYHKRHKVCE  180
VHSKTSKVIV N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69170.11e-20SBP family protein