PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI08389.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | bHLH | ||||||||
Protein Properties | Length: 160aa MW: 17478.6 Da PI: 9.4948 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.5 | 0.00013 | 52 | 89 | 13 | 55 |
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le+ ++++ Lq MCI08389.1 52 RQLIQDRIKELRELVPNgA------KCSIDSLLERSIKHMLFLQ 89 67799************77......5555567777777777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
SSGICGVMSS KGVSSTCPSA CSEQLERSSE PSKNSKKRAR PGESCRPRPR DRQLIQDRIK 60 ELRELVPNGA KCSIDSLLER SIKHMLFLQG IAKHADKLTK XAXTKSKLHH METDILGSSS 120 SEQGSSWAVE VGGHLKVHSI LVENLSKNGQ MLVEVCLSMT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31280.2 | 1e-43 | bHLH family protein |