PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI08075.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 267aa    MW: 29814.9 Da    PI: 8.927
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI08075.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B369.16e-22138239199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f k+lt+sd+++ g ++ p+ +ae+       +g++++ +++  +d +g++W +k+ yr++++r++lt+GW+ Fv+++++ +gD++vF   +++++ l+
  MCI08075.1 138 FAKTLTQSDSNNGGGFSCPRYCAETLfpsldySGNPPS-QDIYPKDVHGETWPFKHVYRGTPKRHLLTTGWSPFVSDKKIVSGDSIVFV--RTENGDLH 233
                 89*********************999*****9656554.59************************************************..4588999* PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 v+++r+
  MCI08075.1 234 VGLRRA 239
                 ***996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MKAKRKGGNL SLTEMNKESK TKMRDLNRGV DPQLWHAIAG GMVQMPEVNS KIFYFPQGHA  60
EHACELVNFS AHSIIPHKIP SLIPCRVESI KYMADPETDE VFAKLRLVPL HISQVRFDDD  120
DGVGGIGVSE TKDKHQCFAK TLTQSDSNNG GGFSCPRYCA ETLFPSLDYS GNPPSQDIYP  180
KDVHGETWPF KHVYRGTPKR HLLTTGWSPF VSDKKIVSGD SIVFVRTENG DLHVGLRRAK  240
RKRDVRPDPS SEMKPGSGIG IRPDLPY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1237244RRAKRKRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.11e-90ARF family protein