PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI06870.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | SBP | ||||||||
Protein Properties | Length: 113aa MW: 13220.5 Da PI: 5.6923 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 80.1 | 3.3e-25 | 62 | 111 | 1 | 50 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEE CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfh 50 +Cqve+C+adlseak+yhrrhkvCe h+kap+v ++g++qrfCqqCsrf MCI06870.1 62 CCQVENCDADLSEAKQYHRRHKVCEYHAKAPAVHIAGMQQRFCQQCSRFD 111 6************************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
METRRSEGKR SLRYKEEDEE EEEDDMDFEE EEDGRRKRVV TDLYSNKRGS NKAGGSSNIT 60 PCCQVENCDA DLSEAKQYHR RHKVCEYHAK APAVHIAGMQ QRFCQQCSRF DKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 3e-25 | SBP family protein |