PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI06684.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 85aa MW: 10104.5 Da PI: 4.9277 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 60.6 | 3.3e-19 | 2 | 84 | 271 | 353 |
GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrvee 353 l++ +pre+ er+ +E+e++g+e+ nv+aceg er+er et+++W+ r+ +aGF + ++++++++ a ++ + + + ++e MCI06684.1 2 LDSIVPREDWERMLIEKEIFGKEALNVIACEGCERVERPETYRQWQVRILRAGFLQQTFGKNTVERAVEKVKSSYHKDFVIDE 84 78889***************************************************************999999988899987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 85 aa Download sequence |
MLDSIVPRED WERMLIEKEI FGKEALNVIA CEGCERVERP ETYRQWQVRI LRAGFLQQTF 60 GKNTVERAVE KVKSSYHKDF VIDED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 5e-34 | GRAS family protein |