PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI06141.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 228aa    MW: 25716.8 Da    PI: 5.585
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI06141.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.13.7e-3385142260
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                 dDgynWrKYGqK+v+gse+prsYY+Ct+++Cp+kkkvers  +++++ei+Y+g+Hnh+k
  MCI06141.1  85 DDGYNWRKYGQKQVRGSENPRSYYKCTYPNCPTKKKVERSI-EGQITEIVYKGNHNHPK 142
                 8****************************************.***************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
QQPWSYQEIT NQNGFSPENN MIQTENNNSS MQSFSPETNM IQAENNNISM HSFSPEIANV  60
QTITNNNGFQ LDHNTNYTIL SRRSDDGYNW RKYGQKQVRG SENPRSYYKC TYPNCPTKKK  120
VERSIEGQIT EIVYKGNHNH PKPQAGVRRN SSSSSNSLVI VPVNPNGNEI HDHSYGSHGN  180
GQMDSVATPE NSSISIGGDD DFEQSSLPRA RSVGADEFVE EEPEPKRW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-40WRKY family protein