PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI05925.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 211aa MW: 23043.2 Da PI: 10.933 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 61 | 1.4e-19 | 125 | 159 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+Cg+tkTp+WR gp g ktLCnaCG++y++ +l MCI05925.1 125 CSHCGVTKTPQWRTGPLGAKTLCNACGVRYKSGRL 159 *******************************9986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 211 aa Download sequence |
MPVVTLTTTE KNPKGVVVSE PKPKNEIPSP VFTTFKTPVQ TKARSKRTRT GVRVWPFGSN 60 TLTESSSSST TSSSTSSSPT SPLLIYTNLV PKXXXXXXXX XXXXXXXXXX XXXTVVVAPA 120 APRRCSHCGV TKTPQWRTGP LGAKTLCNAC GVRYKSGRLL PEYRPACSPT FSSELHSNHH 180 RKVLEMRRKK EVVGGVEIET GLSPSPVVPS F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G51080.1 | 3e-45 | GATA family protein |