PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI05756.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family TCP
Protein Properties Length: 162aa    MW: 17871.8 Da    PI: 8.8867
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI05756.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP116.73e-36211362105
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssasec.eaesssssasnsssg.... 88 
                 +gkkdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak +i++l+++       +    +++ ++++++++++ ++ g    
  MCI05756.1  21 TGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAKLppwhpigE----NQTlKPQEEQNASA-DTTGmiig 114
                 79**************************************************************55543320....33322223332222.22223444 PP

         TCP  89 .....kaaksaakskksqksaa 105
                      +  +++  s+ s+++ +
  MCI05756.1 115 essesNGYSFHLLSQLSENQGN 136
                 4333344444444444444444 PP

Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MRSTTGGEIV QVEGGHIVRS TGKKDRHSKV YTSKGPRDRR VRLSAHTAIE FYDVQDRLGY  60
DRPSKAVDWL IKKAKSSIDK LAKLPPWHPI GENQTLKPQE EQNASADTTG MIIGESSESN  120
GYSFHLLSQL SENQGNNSSF ISAHDVETNP IPFFPTASST SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.21e-49TCP family protein