PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI04965.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 118aa MW: 13682.5 Da PI: 5.2171 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 91.6 | 1.2e-28 | 2 | 115 | 258 | 373 |
GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesg 356 +a++y + +d++++ lpr s++r+++E+ + ++i+nv+a+eg +r+er e +kW++r+++a F+ + ++e+ + ++k++l +++ g+ +++e++ MCI04965.1 2 RSAFNYLWIPYDTVDTFLPRGSKQRQWYEAD-ICWKIENVIAHEGVQRVERDEPIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHA-AGWGLKKEDE 98 6799***************************.********************************************************.99******** PP GRAS 357 slvlgWkdrpLvsvSaW 373 ++vl+Wk++++v++SaW MCI04965.1 99 CIVLTWKGHNVVFASAW 115 ***************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 118 aa Download sequence |
LRSAFNYLWI PYDTVDTFLP RGSKQRQWYE ADICWKIENV IAHEGVQRVE RDEPIGKWEQ 60 RMRNANFQGI GFGEECVGEV KAMLDEHAAG WGLKKEDECI VLTWKGHNVV FASAWLPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49950.1 | 1e-52 | GRAS family protein |