PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI02474.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NAC | ||||||||
Protein Properties | Length: 145aa MW: 16552.4 Da PI: 9.9676 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 134.8 | 5.8e-42 | 7 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeelv++yL++k++++++ + +i+e+d+yk++PwdLp r+nra+ sgyWkatg dk++ + + MCI02474.1 7 LPPGFRFHPTDEELVMHYLCRKCTSQPIAV-PIIAEIDLYKYDPWDLPGXXXXXXXXXXXXXXXXXXXXXXXRPNRAAGSGYWKATGADKPIGH--PKP 102 79**************************99.88***************655455555666677777777899********************99..789 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy g+apkg kt+W+mheyrl MCI02474.1 103 VGIKKALVFYAGKAPKGDKTNWIMHEYRL 131 ***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MASELQLPPG FRFHPTDEEL VMHYLCRKCT SQPIAVPIIA EIDLYKYDPW DLPGXXXXXX 60 XXXXXXXXXX XXXXXXXRPN RAAGSGYWKA TGADKPIGHP KPVGIKKALV FYAGKAPKGD 120 KTNWIMHEYR LADVDRSIRK KNSLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 5e-76 | NAC family protein |