PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI01225.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 110aa MW: 12694.1 Da PI: 10.0944 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 102.7 | 6.3e-32 | 47 | 109 | 2 | 64 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltg 64 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL++ a ai el++ MCI01225.1 47 SGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSASDAISELPS 109 689*********************************************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 110 aa Download sequence |
MEEDEIQAQH KFPRVGNEED NNNGRRDVNR FNSWHHSSRI IRVSRASGGK DRHSKVMTSK 60 GLRDRRVRLS VTTAIQFYDL QDRLGYDQPS KAVEWLIKSA SDAISELPSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G18390.1 | 2e-46 | TCP family protein |