PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI01153.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | TCP | ||||||||
Protein Properties | Length: 183aa MW: 20412.1 Da PI: 4.5231 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 41.3 | 5.5e-13 | 1 | 82 | 38 | 112 |
TCP 38 eLGfdkdsktieWLlqqakpaikeltgt......ssssaseceaesssssasnsssg....kaaksaa.kskksqksaasalnlak 112 +LG+d++sk+++WL+++ak ai++l ++ + +++e+e ++++ + ++ ++++s+ + +++++++++++++ + MCI01153.1 1 RLGYDRPSKAVDWLIKKAKSAIDKLDQLppwnpiP----NATEEEGTNNNVVETNEMviaaENSESSGyNMQQNNHNHHNHSAFIQ 82 7***************************6654331....22322222222222222255553333333366666666665555554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
RLGYDRPSKA VDWLIKKAKS AIDKLDQLPP WNPIPNATEE EGTNNNVVET NEMVIAAENS 60 ESSGYNMQQN NHNHHNHSAF IQSTIDNDAI AFFPTSSVAE TMNFQSYSSD IISRTNNSTQ 120 DLGLSLHSFQ DNSATNDQTL FSESNPVGFD ANYHRIVNWN NDHGTTDMNR TGFMVNSPAF 180 LGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 5e-23 | TCP family protein |