PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI00648.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 107aa    MW: 12662.8 Da    PI: 10.4165
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI00648.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.29e-11111011199
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS...-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  11 lksgrlvlpkkfaeehggkkeesktltledesg...rsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  k++ l +p + a ++ +   e   ++l+++++    + +++  y    +  +++++lt+GW eF kan+L+ gD + F+l++      vv ++r+
  MCI00648.1  11 KKQQVLHVPPRMA-QCVLRDSE--SIVLRTRHNmdrTTCTIRT-YiredKPEKKEMYLTDGWFEFKKANQLRKGDKLQFQLSD-PPDVVVVDIVRR 101
                 5666778888887.66555334..5888887777664445544.33556666666*************************987.444468888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
MIVSQAYANM KKQQVLHVPP RMAQCVLRDS ESIVLRTRHN MDRTTCTIRT YIREDKPEKK  60
EMYLTDGWFE FKKANQLRKG DKLQFQLSDP PDVVVVDIVR RRGLKIN