PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI00271.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | bHLH | ||||||||
Protein Properties | Length: 155aa MW: 17389.2 Da PI: 10.3889 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.4 | 4e-11 | 11 | 59 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ rE+ RRd++N++f eL + l + + +K +Ka+iL A + +k+L+ MCI00271.1 11 SKACREKLRRDKLNDKFVELGSFLEPG---RPPKTDKAAILIDAARMVKQLR 59 5778**********************8...89******************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
GRSDSCAPSS SKACREKLRR DKLNDKFVEL GSFLEPGRPP KTDKAAILID AARMVKQLRG 60 EAQKLKDSNS NIQEKIKELK VEKNELRDEK QRLKAEKEKL EQLMKSMNAQ PSFLTHPPPI 120 PAAFAPQGQV PGNKLMPFMS YPGVAMWQFM PPASV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 4e-83 | bHLH family protein |