PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI00083.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | WRKY | ||||||||
Protein Properties | Length: 218aa MW: 24546.4 Da PI: 8.44 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 50.5 | 4.1e-16 | 1 | 37 | 23 | 59 |
EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 23 sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 sYY+Cts gC+v+k+ver+++d k+v++tYeg+Hnhe MCI00083.1 1 SYYKCTSDGCNVRKHVERASHDLKYVITTYEGKHNHE 37 8***********************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
SYYKCTSDGC NVRKHVERAS HDLKYVITTY EGKHNHEVPT SRNNNQISSN DIALPSCGDN 60 MQVSNISKFE THQTLAPHFD RKPYFSNEFM RPSSIGSFSN DMKFGPSSTS MFQRKYPSLN 120 SIIPYGSYGT NSDHGVAPQA GPIGTRFPMP LPLNLPSSEI FPLSRNIFNY AKPLNYIQSY 180 LSGQHMNDID TRFLDHTSTS LTPPSTLIYQ SVMQNFPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56270.1 | 3e-19 | WRKY family protein |