PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH99992.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family LBD
Protein Properties Length: 126aa    MW: 13128.8 Da    PI: 9.9408
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH99992.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601192.7e-3738126188
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                 +C aCk+lrrkC+++C++apyf  +q +++fa+vhk+FGasnv+kll+++++++r++a++++ yeA+ar++dPvyG+v++il+lqqq++
  MCH99992.1  38 PCGACKFLRRKCSDGCIFAPYFGTDQgAARFAAVHKVFGASNVSKLLSSISTNHRHEAAATISYEAQARLSDPVYGCVSTILALQQQVK 126
                 7***********************9989***********************************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MAESQSGAGS SGNKRSKGTN AAKRAMAGVT QDASTVPPCG ACKFLRRKCS DGCIFAPYFG  60
TDQGAARFAA VHKVFGASNV SKLLSSISTN HRHEAAATIS YEAQARLSDP VYGCVSTILA  120
LQQQVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03760.15e-54LBD family protein