PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCH99709.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 134aa MW: 15269 Da PI: 8.6102 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.5 | 7.5e-30 | 65 | 125 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK++ ++++prsYYrCt++ +C+++k+v+rs+edp++++itY+g+H+++ MCH99709.1 65 EDGYNWRKYGQKDILSAKHPRSYYRCTFRntqNCWATKQVQRSDEDPTIFDITYKGKHTCS 125 8**************************998889**************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 134 aa Download sequence |
TITPLTTSLP ESPASTNGSP LSEDFDGAIQ DHREVKNKSK KRKVMPKLMD QIKVSCESGL 60 EGPHEDGYNW RKYGQKDILS AKHPRSYYRC TFRNTQNCWA TKQVQRSDED PTIFDITYKG 120 KHTCSQGNNA IEPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G11070.2 | 8e-55 | WRKY family protein |