PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH99420.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | HB-other | ||||||||
Protein Properties | Length: 246aa MW: 28171.3 Da PI: 9.5828 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 14.4 | 6.6e-05 | 65 | 124 | 1 | 54 |
TT--SS--HHHHHHHHHHHHHSSS-..-HHHHHHHHHHC....TS-HHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknryp..saeereeLAkkl....gLterqVkvWFqNrRak 54 r++Rt ++++ +e +e++ ++ + +a++ + A+kl ++t +q k+W Nr+ak MCH99420.1 65 RKRRTIMNDKMVELMERALLDEPDMqrNAASLQSWADKLsqhgEVTPSQLKNWLNNRKAK 124 7899999999999999999986655115567788888888888****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MERLSKVVVD ETLEDEKVES LQRRKRKRTI MNDKTVELME SSLLDEPDMQ QNELENEKVG 60 PLQKRKRRTI MNDKMVELME RALLDEPDMQ RNAASLQSWA DKLSQHGEVT PSQLKNWLNN 120 RKAKLARTTK DSSVPDKQKG PVRVSSDSPD NLGLLDIVRQ RAVIVNVRGE EIGKGRVVQV 180 NGKWYGKKLE ELGAYVMDVY ELHADKGMKL PFPSEATGTT FAEAEKKLGA MRVLWDSRRI 240 LVLQSE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 28 | RRKRKR |