PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH98515.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 218aa    MW: 24432.4 Da    PI: 8.4644
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH98515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.22.9e-055476123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C k F++   L  H+++H
  MCH98515.1 54 YTCSFCRKEFKSAQALGGHMNVH 76
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MMKRNNMSTS LKGYHHHTYY NNNPIITNKS PSHSNNGSSS EDYMNGYPWP PRSYTCSFCR  60
KEFKSAQALG GHMNVHRRDR ARLRQSSPPT HEVQPSTQGS SMLNLNNPTN PNFFSKSSSS  120
SPLSSSSSLA TNLKPITCTL PLFVVDGILL NPTLSTMTKE PLRKSNMEQY DDLPCEDGCR  180
MVKKSEILRM GLEIGLPGDY DDDNLDLELR LGTTTYSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.15e-23C2H2 family protein