PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH98333.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

bHLH

Protein Properties

Length: 148aa MW: 16442.5 Da PI: 11.3036

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH98333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.5	1.2e-08	121	145	5	29
HHHHHHHHHHHHHHHHHHHHCTSCC CS HLH 5 hnerErrRRdriNsafeeLrellPk 29 h + ErrRR+++N+ f+ Lr llP+ MCH98333.1 121 HMISERRRREKLNENFQALRALLPQ 145 8899********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 148 aa Download sequence
MRSLSTAGSP EYSSLIFNNI PSGTSPSHFP PDHTHLGGSI IPPMRPISNT XXXXXXXXXX 60 XXPTQLFSTT QMNHQNDAIM RAIQNVLSTP PSQQNLHGVH PEASAFGSTQ AMRPSSNQLH 120 HMISERRRRE KLNENFQALR ALLPQGTK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	125	130	ERRRRE
2	126	131	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	1e-12	bHLH family protein