PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH97543.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | C2H2 | ||||||||
Protein Properties | Length: 147aa MW: 16887.1 Da PI: 9.1675 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16 | 3.3e-05 | 68 | 90 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ MCH97543.1 68 FMCRKCGKAFAVRGDWRTHEKNC 90 89*****************9987 PP | |||||||
2 | zf-C2H2 | 10.7 | 0.0017 | 98 | 113 | 6 | 21 |
TTEEESSHHHHHHHHH CS zf-C2H2 6 CgksFsrksnLkrHir 21 Cg F++k +Lk Hir MCH97543.1 98 CGSDFKHKRSLKDHIR 113 ***************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MHMWGHGSQY RKGPESLRGT QPTGMLRLPC YCCSPGCRNN IDHPRAKPLK DFRTLQTHYK 60 RKHGIKPFMC RKCGKAFAVR GDWRTHEKNC GKLWYCLCGS DFKHKRSLKD HIRAFGSGHA 120 AYGINGFEEE DEPASEVEQD NDSTQTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 1e-102 | C2H2 family protein |