PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH97310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | LBD | ||||||||
Protein Properties | Length: 128aa MW: 14449.6 Da PI: 8.476 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 133.8 | 6.7e-42 | 7 | 106 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+++C +apyf e+p++fanvh++FGasnv kllk+l+ ++reda++sl+yeAe r++dPvyG+vg+i+ lqq+l++ ++el+++k+ MCH97310.1 7 PCAACKYLRRKCTQECDFAPYFLPESPQRFANVHRVFGASNVAKLLKELNATDREDAVKSLAYEAESRIKDPVYGCVGLISMLQQRLKEIQHELHAAKK 105 7***********************************************************************************************998 PP DUF260 100 e 100 e MCH97310.1 106 E 106 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence |
MSSSNSPCAA CKYLRRKCTQ ECDFAPYFLP ESPQRFANVH RVFGASNVAK LLKELNATDR 60 EDAVKSLAYE AESRIKDPVY GCVGLISMLQ QRLKEIQHEL HAAKKELSSY NLNPQTMQYL 120 LTHPGTVI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66870.1 | 2e-58 | LBD family protein |