PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH97296.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 190aa    MW: 21111.2 Da    PI: 5.2808
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH97296.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.8e-052951123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ Fs+   L  H++ H
  MCH97296.1 29 YECNFCKRGFSNAQALGGHMNIH 51
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MESDQCDQGG GGGGDDQDGL KQVTNLRSYE CNFCKRGFSN AQALGGHMNI HRKDKAKLKQ  60
QSSNLEQGNS SDQELNKLLP NFLSSSNIVL PQKQDQQHVP SRSEEILVID HTRQQLPLFS  120
ESPTKNEMQI QQGGQIHQRE ITTTTATTTT TQEALLLSND QDSSLELDLE LRLGSEPHDS  180
SKPTGTRKFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.13e-17C2H2 family protein