PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH97069.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | SBP | ||||||||
Protein Properties | Length: 211aa MW: 23582.4 Da PI: 10.2023 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132 | 2.1e-41 | 96 | 173 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls+ak+yhrrhkvCe+hska+++l+ +++qrfCqqCsrfh l efDe+krsCrrrLa+hn+rrrk+q+ MCH97069.1 96 MCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQQCSRFHPLLEFDEGKRSCRRRLAGHNRRRRKTQP 173 6**************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MLSNPFYNSS NNKKRDLSYD VVHIPNDNWN PKEWNWDSVR FTAKSTVSQQ QHSEETLKLN 60 LGGVVSGGVN SGVNGGVVNR ANKRVRSGSP TASYPMCQVD NCKEDLSKAK DYHRRHKVCE 120 AHSKASKALL GNQMQRFCQQ CSRFHPLLEF DEGKRSCRRR LAGHNRRRRK TQPDEVATSS 180 PPLNQQVVAA AANLEIFNLL TAIADGSQGM G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G20980.1 | 2e-53 | SBP family protein |