PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH96058.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 277aa    MW: 31768.3 Da    PI: 5.5854
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH96058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.61.1e-3298154259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ d++++ei+Y+g+Hnh 
  MCH96058.1  98 EDGYNWRKYGQKQVKGSEYPRSYYKCTQSNCQVKKKVERSH-DGQITEIIYRGHHNHA 154
                 7****************************************.***************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MMNEAHEDMK MLVQGQQMLD FSVPKDFANN YLARNNGVHF DNDVKMVDDM FIDISRSEEG  60
SDISTLPENL VHDEDIRQLL LEEXXKEMSH ASRGKTSEDG YNWRKYGQKQ VKGSEYPRSY  120
YKCTQSNCQV KKKVERSHDG QITEIIYRGH HNHAIPNSSR RGSVPSNDEM SDISETNETC  180
NRADADSIWG NIQSREKDAK HHSDWKLDGQ ERTSPPSSRT ELSNPTKRFR SLGMYESDEA  240
REHYSTLANH NGDKGGATQA VLRLEDDVED AESKLKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.12e-32WRKY family protein