PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH95022.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | YABBY | ||||||||
Protein Properties | Length: 127aa MW: 14177.4 Da PI: 9.3792 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 79.5 | 1e-24 | 15 | 127 | 6 | 133 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsen 104 + +++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l ++ + + +++++h +l + + +k+ ++s+s MCH95022.1 15 TDQHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLTTRPPNSKTPTVDH-----------TLTLQ----GIYSSKKGHPSSSSXXX-XXXX 97 5679***********************************999888888888888887...........22222....23344444444444443.3566 PP YABBY 105 edeevprvpp.virPPekrqrvPsaynrfi 133 d +p++pp v++PPek+ r Psaynrf+ MCH95022.1 98 XDSLSPKPPPfVVKPPEKKHRLPSAYNRFM 127 77778888888******************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MNQEEKVTMD LIPATDQHLC YVRCNFCNTV LAVGIPCKRL LDTVTVKCGH CSNLSFLTTR 60 PPNSKTPTVD HTLTLQGIYS SKKGHPSSSS XXXXXXXXDS LSPKPPPFVV KPPEKKHRLP 120 SAYNRFM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 4e-28 | YABBY family protein |