PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH94171.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 248aa    MW: 27306.3 Da    PI: 6.7922
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH94171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.0003895117123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C++ F ++  L  H++ H
  MCH94171.1  95 FSCNYCKRKFFSSQALGGHQNAH 117
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MMMTPNLNLE AENSLEVSSQ VGSNDLTKDS ATTSSCLTNL TKPEINLGSI SLNLTLNFDP  60
SDEDLKETSD TNSEVVGADH AHNTTTSAAP IHRVFSCNYC KRKFFSSQAL GGHQNAHKRE  120
RTMAKRAMRI GMFTERYTSL ASLPLHGSSS FHSLGIQAHS AMHQQYMPSS SLSMRAHDMR  180
ATAKFEKDCF GGAPMFMHXD DVGIFWPGSF RQIDQSVDAH NSNLNTNFVV ATEPPQQKST  240
APDLTLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.12e-41C2H2 family protein