PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH93805.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | C2H2 | ||||||||
Protein Properties | Length: 246aa MW: 27943.8 Da PI: 7.8545 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 25.6 | 3.1e-08 | 66 | 87 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r+ nL+ H+r H MCH93805.1 66 FCEICGKGFTRNANLRMHMRAH 87 6*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MCYKTCDEND TLLTTYPATI TVPPTNCYRT HGENNNCVND AVMNSTIDSD IVELDAVELL 60 ANHFHFCEIC GKGFTRNANL RMHMRAHGEK FKTPESLRCA RETRLSATRF SCPFDGCKRN 120 RVHKKFTPLK SVLCLRNHFK RSHCPKTHTC DRCRKKSFAV VSDLKSHVKQ CKGESTWKCS 180 CGTTFSRKEK LFGHVERFEG HSPAVVEVGD ESMAAEECVG QILTKESDCL DGLPEGFFDD 240 LDKFWV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34370.3 | 3e-64 | C2H2 family protein |