PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH93572.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Dof
Protein Properties Length: 260aa    MW: 29337.9 Da    PI: 4.9938
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH93572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof100.11.5e-311471360
      zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                e+ lkcp C+stntkf y+nny lsqPr+fCk+Cr yWt+G alrnvPvGg+  k+ +
  MCH93572.1 14 EAPLKCPHCESTNTKFVYFNNYDLSQPRHFCKTCRWYWTRGEALRNVPVGGALSKSSN 71
                6789***********************************************9988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MTDKARTANM PMPEAPLKCP HCESTNTKFV YFNNYDLSQP RHFCKTCRWY WTRGEALRNV  60
PVGGALSKSS NNGNSIKSPA ILSNTVADPT MKRYDVYLSF CEEDSLSFVV GISTTLTSQH  120
GLVVFLDTQR FESDDDDQRL RHSESTLNVI GDCKIVIIVL SKNYTNSRGC LDELEKITEC  180
CRTSDDLTVV PVFYDGVYSP NTRLQGDMYG EAFPDFLDRI SMEETSEKED KFMSWVAAIS  240
YNKAYIYSGS AYFGNALIHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.12e-33Dof family protein