PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH92267.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 168aa    MW: 18642.8 Da    PI: 7.2712
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH92267.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.46.1e-3358114259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers   ++v+ i+Y+geHnh+
  MCH92267.1  58 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPSCPVKKKVERSL-AGHVTAIIYKGEHNHQ 114
                 8****************************************.9**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MSHQQQTLAQ VSXXXXXXXX XXXXXXXXXX SVSASTDHAA LSEQRQQSSS LNVDKPADDG  60
YNWRKYGQKH VKGSEFPRSY YKCTHPSCPV KKKVERSLAG HVTAIIYKGE HNHQRPSNKR  120
SKDTLTSNDS SNMQGNADSS YQGMMDPESS QATGEHVSGT SDSEEIGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.16e-43WRKY family protein