PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH91740.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

TCP

Protein Properties

Length: 172aa MW: 18092.5 Da PI: 10.286

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH91740.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.5	7.1e-36	44	123	5	84
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasn 84 ++++++hTkv+gR+RRvR++ +caar+F+L++eLG+ +d++tieWLl+qa+pai++ tgt++ ++ +++ s ss s+ MCH91740.1 44 SRSTKDRHTKVNGRGRRVRMPPLCAARVFQLTRELGHRSDGETIEWLLRQAEPAIIAVTGTGTVPSGPVSTTSPASSFSK 123 679**********************************************************7777744433333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MTSEVVFQTF SQSETKPSTV ATTVATTSSD PNAQLTTVKR KTSSRSTKDR HTKVNGRGRR 60 VRMPPLCAAR VFQLTRELGH RSDGETIEWL LRQAEPAIIA VTGTGTVPSG PVSTTSPASS 120 FSKPSVSCNV VPPVSSVGLN GSGMFAAAAL PLQQPSCRLD LCPPSGMEYA AA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	1e-29	TCP family protein