PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH91598.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GATA
Protein Properties Length: 339aa    MW: 36889.7 Da    PI: 6.142
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH91598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA41.81.5e-13239273135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +Cgt     WR gp g+ktLCnaCG+++++ +l
  MCH91598.1 239 CLHCGTDXXXXWRTGPMGPKTLCNACGVRFKSGRL 273
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MEAPDYFVGG YYGAGVHGGI DQFSPEKRHG HGVGSDQKPC ESFAIDDLLD FSNADAIMSD  60
GFFDNVAGNS TDSSNVTAVD SCNSSGSGGE NRFAGTIVPY GFSGDVQLNG ELCVPYDEMA  120
ELEWLSNFVE DSYSAEEELK TLQLLSGAGA VKPQTPESSS STDTLPAFSS DESARNFNAS  180
FLGPETPLPG KARSKRSRAA PGDWSTRLLH IPDAPPQQMK IVQVKKREDP NVECSGRKCL  240
HCGTDXXXXW RTGPMGPKTL CNACGVRFKS GRLVPEYRPA ASPTFVSAKH SNSHRKVLEL  300
RRQKEMQRSQ HQQLLSHSSI FGVSSNGGDD FINYHHHHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.14e-74GATA family protein