PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH91341.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 88aa    MW: 10049.6 Da    PI: 9.4313
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH91341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding62.39.9e-201461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lvd ++++G g+W++ ++  g++R++k+c++rw +yl
       MCH91341.1 14 KGPWTPEEDRILVDHIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61
                     79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MGRAPCCDES GLKKGPWTPE EDRILVDHIE KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY  60
LRPDIKRGKF TEEDEKTIIN LHAVLGNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.24e-56MYB family protein