PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH91184.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | WRKY | ||||||||
Protein Properties | Length: 168aa MW: 18642.8 Da PI: 7.2712 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.4 | 6.1e-33 | 58 | 114 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers ++v+ i+Y+geHnh+ MCH91184.1 58 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPSCPVKKKVERSL-AGHVTAIIYKGEHNHQ 114 8****************************************.9**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MSHQQQTLAQ VSXXXXXXXX XXXXXXXXXX SVSASTDHAA LSEQRQQSSS LNVDKPADDG 60 YNWRKYGQKH VKGSEFPRSY YKCTHPSCPV KKKVERSLAG HVTAIIYKGE HNHQRPSNKR 120 SKDTLTSNDS SNMQGNADSS YQGMMDPESS QATGEHVSGT SDSEEIGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03340.1 | 6e-43 | WRKY family protein |