PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH90625.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | bHLH | ||||||||
Protein Properties | Length: 104aa MW: 11743.6 Da PI: 9.685 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 54 | 3e-17 | 26 | 72 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq MCH90625.1 26 VHNLSERRRRDRINEKMKALQELIPRS-----NKSDKASMLDEAIEYLKSLQ 72 6*************************7.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 104 aa Download sequence |
DIDFESAEAK KNVSGSSTKR SRAAEVHNLS ERRRRDRINE KMKALQELIP RSNKSDKASM 60 LDEAIEYLKS LQLQVQMMSM GCGMVPMMFP GIQQYMPTIG MGMG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 31 | 36 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20180.1 | 1e-39 | bHLH family protein |