PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH89969.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family HB-other
Protein Properties Length: 262aa    MW: 29260.5 Da    PI: 6.1834
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH89969.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.11.3e-171872357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                kR   t+ ql+ Le+++ +++yp++e +  +A++l+Lte+qV+ WF+ rR k+k+
  MCH89969.1 18 KRKLKTPAQLKGLEKFYTEHKYPTEELKLAIAEELELTEKQVSGWFCHRRLKDKR 72
                79999************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
SSELQPEENK ASAEKNPKRK LKTPAQLKGL EKFYTEHKYP TEELKLAIAE ELELTEKQVS  60
GWFCHRRLKD KRLLKEEANA AANGRQDRSS GVIQDRGSGL GQDSCGSSKH GDYKYLDPKE  120
VESHGLYNRD LSVADMTYGR RNQFSENVSG MDDTSSESSS FLQDRLYPQG QDPYETEPSR  180
YLAHSKALPP LNPKGTVNMG YKPSGYLKVK GEIEHAAITA VKKQLGRNYR EDGPLLGVEF  240
DPLPPGAFEC QTEDPVHADL LG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11723PKRKLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.14e-69HB-other family protein