PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH89817.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | MYB_related | ||||||||
Protein Properties | Length: 247aa MW: 27660.8 Da PI: 8.4475 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.2 | 1.4e-11 | 2 | 32 | 14 | 46 |
HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqk 46 +a++ +G++ W+ Iar ++ gRt++ +k++w+ MCH89817.1 2 QAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 32 79*******.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MQAHRIYGNK WAMIARLFPG RTDNAVKNHW HVIMARKYRE QSSAYRRRRL NQSVYRRIED 60 NANFVSRDIA TGMEPVPSPY CINLPNGYNM TTSFPFSSFH GVIDGGVDCG LNGSAHLSGS 120 KEAISSNKQT PSSLFGLFAQ QTPLDFISGG IRNDHYSQMK CWDNQPTGFY HQYPQYMMQM 180 QQQNNNFYSF SSNSTTAATS TTQILGSEVS LSSVAATEDH RDQVLMSNPP PSDTIPFIDF 240 LGVGATT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 45 | 50 | YRRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26780.1 | 7e-28 | MYB family protein |